Distribution, species composition and management implications of seed banks in southern New England coastal plain ponds

Author Posting. © The Author(s), 2009. This is the author's version of the work. It is posted here by permission of Elsevier B.V. for personal use, not for redistribution. The definitive version was published in Biological Conservation 142 (2009): 1350-1361, doi:10.1016/j.biocon.2009.01.020.Buried seeds that germinate during periods of low water or water level drawdown can play important roles in shaping plant community composition, community dynamics and species richness in ecosystems with fluctuating water levels. Northeastern US coastal plain ponds have fluctuating water levels and contain a characteristic shoreline flora that contains many rare plants. The objectives of this study were to: (1) test whether geographically distant ponds in Cape Cod and Martha’s Vineyard had distinct seed banks, (2) determine if hydrologic status as permanent and ephemeral ponds led to differences in seed banks, and (3) examine seed diversity and seed abundance across gradients of shoreline elevations and sediment characteristics. Viable seeds of 45 plant species were identified from 9 ponds. Native species dominated pond-shore seed banks and made up 89 to 100% of all species. There was high overlap in seed bank composition across hydrological classes and geographic regions. One hydrological class captured 73-76% of total species and one geographical region captured 69-78% of the total species recovered from the entire suite of seed bank samples. Seeds were relatively evenly distributed along the shorelines of ephemeral ponds but seed diversity and abundance were lower at low elevations in permanent ponds. Results suggest that strategies to protect pond shorelines to capture maximum diversity of coastal plain pond plants contained in pond sediment seed banks should be implemented across pond hydrologic classes and across a wide geographic area. Shoreline seed distributions indicate that ground-water withdrawals or climate changes that lower pond water levels in permanent ponds will reduce the diversity and abundance of plants recovered from seed banks by shifting water levels to a shoreline zone of high sediment organic matter where seed densities are lower. This effect will be much less in ephemeral ponds where seed diversity and abundance on pond bottoms was high.This study was funded by the Massachusetts Environmental Trust and the Barnstable Water Company

Insights into Australian bat lyssavirus in insectivorous bats of Western Australia

Australian bat lyssavirus (ABLV) is a known causative agent of neurological disease in bats, humans and horses. It has been isolated from four species of pteropid bats and a single microbat species (Saccolaimus flaviventris). To date, ABLV surveillance has primarily been passive, with active surveillance concentrating on eastern and northern Australian bat populations. As a result, there is scant regional ABLV information for large areas of the country. To better inform the local public health risks associated with human-bat interactions, this study describes the lyssavirus prevalence in microbat communities in the South West Botanical Province of Western Australia. We used targeted real-time PCR assays to detect viral RNA shedding in 839 oral swabs representing 12 species of microbats, which were sampled over two consecutive summers spanning 2016–2018. Additionally, we tested 649 serum samples via Luminex® assay for reactivity to lyssavirus antigens. Active lyssavirus infection was not detected in any of the samples. Lyssavirus antibodies were detected in 19 individuals across six species, with a crude prevalence of 2.9% (95% CI: 1.8–4.5%) over the two years. In addition, we present the first records of lyssavirus exposure in two Nyctophilus species, and Falsistrellus mackenziei

A View through Faraday's Fog 2: Parsec Scale Rotation Measures in 40 AGN

Results from a survey of the parsec scale Faraday rotation measure properties for 40 quasars, radio galaxies and BL Lac objects are presented. Core rotation measures for quasars vary from approximately 500 to several thousand radians per meter squared. Quasar jets have rotation measures which are typically 500 radians per meter squared or less. The cores and jets of the BL Lac objects have rotation measures similar to those found in quasar jets. The jets of radio galaxies exhibit a range of rotation measures from a few hundred radians per meter squared to almost 10,000 radians per meter squared for the jet of M87. Radio galaxy cores are generally depolarized, and only one of four radio galaxies (3C-120) has a detectable rotation measure in the core. Several potential identities for the foreground Faraday screen are considered and we believe the most promising candidate for all the AGN types considered is a screen in close proximity to the jet. This constrains the path length to approximately 10 parsecs, and magnetic field strengths of approximately 1 microGauss can account for the observed rotation measures. For 27 out of 34 quasars and BL Lacs their optically thick cores have good agreement to a lambda squared law. This requires the different tau = 1 surfaces to have the same intrinsic polarization angle independent of frequency and distance from the black hole.Comment: Accepted to the Astrophysical Journal: 71 pages, 40 figure

Far Ultraviolet Emission in the A2597 and A2204 Brightest Cluster Galaxies

We use the Hubble Space Telescope ACS/SBC and Very Large Telescope FORS cameras to observe the Brightest Cluster Galaxies in Abell 2597 and Abell 2204 in the far-ultraviolet (FUV) F150LP and optical U, B, V, R, I Bessel filters. The FUV and U band emission is enhanced in bright, filamentary structures surrounding the BCG nuclei. These filaments can be traced out to 20 kpc from the nuclei in the FUV. Excess FUV and U band light is determined by removing emission due to the underlying old stellar population and mapped with 1 arcsec spatial resolution over the central 20 kpc regions of both galaxies. We find the FUV and U excess emission to be spatially coincident and a stellar interpretation requires the existence of a significant amount of 10000-50000 K stars. Correcting for nebular continuum emission and dust intrinsic to the BCG further increases the FUV to U band emission ratio and implies that stars alone may not suffice to explain the observations. However, lack of detailed information on the gas and dust distribution and extinction law in these systems prevents us from ruling out a purely stellar origin. Non-stellar processes, such as the central AGN, Scattering, Synchrotron and Bremsstrahlung emission are investigated and found to not be able to explain the FUV and U band measurements in A2597. Contributions from non-thermal processes not treated here should be investigated. Comparing the FUV emission to the optical H-alpha line emitting nebula shows good agreement on kpc-scales in both A2597 and A2204. In concordance with an earlier investigation by O'Dea et al. (2004) we find that O-stars can account for the ionising photons necessary to explain the observed H-alpha line emission.Comment: accepted by mnra

Organoids and bioengineered intestinal models: Potential solutions to the Cryptosporidium culturing dilemma

Cryptosporidium is a major cause of severe diarrhea-related disease in children in developing countries, but currently no vaccine or effective treatment exists for those who are most at risk of serious illness. This is partly due to the lack of in vitro culturing methods that are able to support the entire Cryptosporidium life cycle, which has led to research in Cryptosporidium biology lagging behind other protozoan parasites. In vivo models such as gnotobiotic piglets are complex, and standard in vitro culturing methods in transformed cell lines, such as HCT-8 cells, have not been able to fully support fertilization occurring in vitro. Additionally, the Cryptosporidium life cycle has also been reported to occur in the absence of host cells. Recently developed bioengineered intestinal models, however, have shown more promising results and are able to reproduce a whole cycle of infectivity in one model system. This review evaluates the recent advances in Cryptosporidium culturing techniques and proposes future directions for research that may build upon these successes

STIS spectroscopy of the emission line gas in the nuclei of nearby FR-I galaxies

We present the results of the analysis of a set of medium resolution spectra, obtained by the Space Telescope Imaging Spectrograph on board the Hubble Space Telescope, of the emission line gas present in the nuclei of a complete sample of 21 nearby, early-type galaxies with radio jets (the UGC FR-I Sample). For each galaxy nucleus we present spectroscopic data in the region of H-alpha and the dervived kinematics. We find that in 67% of the nuclei the gas appears to be rotating and, with one exception, the cases where rotation is not seen are either face on or have complex central morphologies. We find that in 62% of the nuclei the fit to the central spectrum is improved by the inclusion of a broad component. The broad components have a mean velocity dispersion of 1349 +/- 345 km\s and are redshifted from the narrow line components (assuming an origin in H-alpha) by 486 +/- 443 km\s.Comment: 119 pages, 26 figures, ApJS Accepted, version with full figures available at http://www.astro.columbia.edu/~jake/pub/fr1datapaper.pd

The Distribution and Condition of the Warm Molecular Gas in Abell 2597 and Sersic 159-03

We have used the SINFONI integral field spectrograph to map the near-infrared K-band emission lines of molecular and ionised hydrogen in the central regions of two cool core galaxy clusters, Abell 2597 and Sersic 159-03. Gas is detected out to 20 kpc from the nuclei of the brightest cluster galaxies and found to be distributed in clumps and filaments around it. The ionised and molecular gas phases trace each other closely in extent and dynamical state. Both gas phases show signs of interaction with the active nucleus. Within the nuclear regions the kinetic luminosity of this gas is found to be somewhat smaller than the current radio luminosity. Outside the nuclear region the gas has a low velocity dispersion and shows smooth velocity gradients. There is no strong correlation between the intensity of the molecular and ionised gas emission and either the radio or X-ray emission. The molecular gas in Abell 2597 and Sersic 159-03 is well described by a gas in local thermal equilibrium (LTE) with a single excitation temperature T_exc ~ 2300 K. The emission line ratios do not vary strongly as function of position, with the exception of the nuclear regions where the ionised to molecular gas ratio is found decrease. These constant line ratios imply a single source of heating and excitation for both gas phases.Comment: 44 pages, 32 figures, accepted for publication in MNRA

Chandra Discovery of a 300 kpc X-ray Jet in the GPS Quasar PKS1127-145

We have discovered an X-ray jet with Chandra imaging of the z=1.187 radio-loud quasar PKS1127-145. In this paper we present the Chandra X-ray data, follow-up VLA observations, and optical imaging using the HST WFPC2. The X-ray jet contains 273+/-5 net counts in 27ksec and extends ~30 arcsec, from the quasar core, corresponding to a minimum projected linear size of ~330/h_50 kpc. The evaluation of the X-ray emission processes is complicated by the observed offsets between X-ray and radio brightness peaks. We discuss the problems posed by these observations to jet models. In addition, PKS1127-145 is a Giga-Hertz Peaked Spectrum radio source, a member of the class of radio sources suspected to be young or ``frustrated'' versions of FRI radio galaxies. However the discovery of an X-ray and radio jet extending well outside the host galaxy of PKS1127-145 suggests that activity in this and other GPS sources may be long-lived and complex.Comment: 22 pages, 11 ps figures, 1 figure in a JPG file, 3 tables. AASTEX. Accepted by The Astrophysical Journa

An optical-IR jet in 3C133

We report the discovery of a new optical-IR synchrotron jet in the radio galaxy 3C133 from our HST/NICMOS snapshot survey. The jet and eastern hotspot are well resolved, and visible at both optical and IR wavelengths. The IR jet follows the morphology of the inner part of the radio jet, with three distinct knots identified with features in the radio. The radio-IR SED's of the knots are examined, along with those of two more distant hotspots at the eastern extreme of the radio feature. The detected emission appears to be synchrotron, with peaks in the NIR for all except one case, which exhibits a power-law spectrum throughout.Comment: ApJ accepted. 14 pages, 6 figure

Infrared Emission from the Nearby Cool Core Cluster Abell 2597

We observed the brightest central galaxy (BCG) in the nearby (z=0.0821) cool core galaxy cluster Abell 2597 with the IRAC and MIPS instruments on board the Spitzer Space Telescope. The BCG was clearly detected in all Spitzer bandpasses, including the 70 and 160 micron wavebands. We report aperture photometry of the BCG. The spectral energy distribution exhibits a clear excess in the FIR over a Rayleigh-Jeans stellar tail, indicating a star formation rate of ~4-5 solar masses per year, consistent with the estimates from the UV and its H-alpha luminosity. This large FIR luminosity is consistent with that of a starburst or a Luminous Infrared Galaxy (LIRG), but together with a very massive and old population of stars that dominate the energy output of the galaxy. If the dust is at one temperature, the ratio of 70 to 160 micron fluxes indicate that the dust emitting mid-IR in this source is somewhat hotter than the dust emitting mid-IR in two BCGs at higher-redshift (z~0.2-0.3) and higher FIR luminosities observed earlier by Spitzer, in clusters Abell 1835 and Zwicky 3146.Comment: Accepted at Ap